This model is an example of a Protein Comparison problem formulated as a quadratic assignment problem using the Gurobi Python API and solved with the Gurobi Optimizer.
This model is example 29 from the fifth edition of Model Building in Mathematical Programming by H. Paul Williams on pages 290-291 and 345.
This modeling example is at the advanced level, where we assume that you know Python and the Gurobi Python API and that you have advanced knowledge of building mathematical optimization models. Typically, the objective function and/or constraints of these examples are complex or require advanced features of the Gurobi Python API.
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Modeling examples are coded using the Gurobi Python API in Jupyter Notebook. In order to use the Jupyter Notebooks, you must have a Gurobi License. If you do not have a license, you can request an Evaluation License as a Commercial User or download a free license as an Academic User.
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