Protein Comparison

protein_comparison

This model is an example of a Protein Comparison problem formulated as a quadratic assignment problem using the Gurobi Python API and solved with the Gurobi Optimizer.

This model is example 29 from the fifth edition of Model Building in Mathematical Programming by H. Paul Williams on pages 290-291 and 345.

This modeling example is at the advanced level, where we assume that you know Python and the Gurobi Python API and that you have advanced knowledge of building mathematical optimization models. Typically, the objective function and/or constraints of these examples are complex or require advanced features of the Gurobi Python API.


 

Request a Gurobi Evaluation License or Free Academic License

Modeling examples are coded using the Gurobi Python API in Jupyter Notebook. In order to use the Jupyter Notebooks, you must have a Gurobi License. If you do not have a license, you can request an Evaluation License as a Commercial User or download a free license as an Academic User.

 

Commercial Users: Free Evaluation Version Academic Users: Free Academic Version

 


 

Access the Jupyter Notebook Modeling Example

Click on the button below to be directed to GitHub where you can download the repository for the Protein Comparison Jupyter Notebook modeling example.

 

Protein Comparison

 


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